| Preface |
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xi | |
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Genetics and the Organism |
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1 | (26) |
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Genes as determinants of the inherent properties of species |
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3 | (5) |
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8 | (3) |
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Methodologies used in genetics |
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11 | (2) |
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13 | (3) |
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Genes, the environment, and the organism |
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16 | (11) |
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Part I: TRANSMISSION GENETIC ANALYSIS |
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27 | (46) |
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29 | (19) |
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Sex chromosomes and sex-linked inheritance |
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48 | (7) |
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55 | (18) |
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The Chromosomal Basis of Inheritance |
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73 | (42) |
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Historical development of the chromosome theory |
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75 | (5) |
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The nature of chromosomes |
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80 | (10) |
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90 | (6) |
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Chromosome behavior and inheritance patterns in eukaryotes |
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96 | (7) |
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103 | (12) |
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Eukaryote Chromosome Mapping by Recombination |
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115 | (36) |
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The discovery of the inheritance patterns of linked genes |
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117 | (4) |
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121 | (3) |
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124 | (7) |
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Using the chi-square test in linkage analysis |
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131 | (2) |
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Using Lod scores to assess linkage in human pedigrees |
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133 | (1) |
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Accounting for unseen multiple crossovers |
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134 | (17) |
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The Genetics of Bacteria and Their Viruses |
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151 | (34) |
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Working with microorganisms |
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153 | (2) |
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155 | (11) |
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166 | (1) |
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166 | (4) |
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170 | (4) |
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Physical maps versus linkage maps |
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174 | (11) |
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Part II: THE RELATIONSHIP OF DNA AND PHENOTYPE |
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185 | (42) |
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187 | (5) |
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Interactions between the alleles of one gene |
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192 | (5) |
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Interacting genes and proteins |
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197 | (12) |
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Applications of chi-square (x2) test to gene interaction ratios |
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209 | (18) |
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DNA: Structure and Replication |
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227 | (28) |
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DNA: the genetic material |
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229 | (2) |
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231 | (6) |
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Semiconservative replication |
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237 | (3) |
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Overview of DNA replication |
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240 | (2) |
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The replisome: a remarkable replication machine |
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242 | (2) |
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Assembling the replisome: replication initiation |
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244 | (3) |
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Telomeres and telomerase: replication termination |
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247 | (8) |
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RNA: Transcription and Processing |
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255 | (18) |
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257 | (2) |
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259 | (5) |
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Transcription in eukaryotes |
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264 | (9) |
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Proteins and Their Synthesis |
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273 | (28) |
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275 | (2) |
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Colinearity of gene and protein |
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277 | (1) |
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278 | (4) |
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282 | (3) |
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285 | (6) |
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291 | (10) |
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Regulation of Gene Transcription |
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301 | (40) |
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Prokaryotic gene regulation |
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303 | (4) |
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Discovery of the lac system of negative control |
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307 | (5) |
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Catabolite repression of the lac operon: positive control |
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312 | (3) |
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Dual positive and negative control: the arabinose operon |
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315 | (1) |
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316 | (1) |
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Transcriptional regulation in eukaryotes |
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316 | (6) |
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Chromatin's role in eukaryotic gene regulation |
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322 | (19) |
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Part III: GENOME STRUCTURE AND ENGINEERING |
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Gene Isolation and Manipulation |
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341 | (48) |
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Generating recombinant molecules |
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343 | (17) |
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DNA amplification in vitro: the polymerase chain reaction |
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360 | (2) |
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Zeroing in on the gene for alkaptonuria: another case study |
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362 | (2) |
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Detecting human disease alleles: molecular genetic diagnostics |
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364 | (2) |
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366 | (23) |
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389 | (34) |
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391 | (1) |
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The sequence map of a genome |
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392 | (2) |
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Creating genomic sequence maps |
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394 | (4) |
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Using genomic sequence to find a specific gene |
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398 | (8) |
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Bioinformatics: meaning from genomic sequence |
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406 | (4) |
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Take-home lessons from the genomes |
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410 | (3) |
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413 | (10) |
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The Dynamic Genome: Transposable Elements |
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423 | (28) |
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Discovery of transposable elements in maize |
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425 | (4) |
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Transposable elements in prokaryotes |
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429 | (5) |
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Transposable elements in eukaryotes |
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434 | (6) |
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The dynamic genome: more transposable elements than ever imagined |
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440 | (5) |
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Host regulation of transposable elements |
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445 | (6) |
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Part IV: THE NATURE OF HERITABLE CHANGE |
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Mutation, Repair, and Recombination |
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451 | (30) |
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453 | (8) |
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461 | (7) |
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Biological repair mechanisms |
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468 | (5) |
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The mechanism of meiotic crossing-over |
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473 | (8) |
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Large-Scale Chromosomal Changes |
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481 | (40) |
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Changes in chromosome number |
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483 | (13) |
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Changes in chromosome structure |
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496 | (10) |
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Overall incidence of human chromosome mutations |
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506 | (15) |
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Part V: FROM GENES TO PROCESSES |
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Dissection of Gene Function |
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521 | (24) |
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523 | (7) |
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530 | (5) |
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Analysis of recovered mutations |
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535 | (2) |
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Broader applications of functional dissection |
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537 | (8) |
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Genetic Regulation of Cell Number: Normal and Cancer Cells |
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545 | (30) |
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The balance between cell loss and proliferation |
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547 | (1) |
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The cell-proliferation machinery of the cell cycle |
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548 | (4) |
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The machinery of programmed cell death |
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552 | (1) |
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553 | (5) |
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Cancer: the genetics of aberrant cell number regulation |
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558 | (8) |
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Applying genomic approaches to cancer research, diagnosis, and therapies |
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566 | (9) |
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The Genetic Basis of Development |
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575 | (36) |
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The logic of building the body plan |
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577 | (1) |
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Binary fate decisions: the germ line versus the soma |
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578 | (4) |
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Forming complex pattern: the logic of the decision-making process |
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582 | (1) |
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Forming complex pattern: establishing positional information |
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583 | (8) |
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Forming complex pattern: utilizing positional information to establish cell fates |
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591 | (6) |
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597 | (3) |
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The many parallels in vertebrate and insect pattern formation |
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600 | (2) |
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The genetics of sex determination in humans |
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602 | (1) |
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Do the lessons of animal development apply to plants? |
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603 | (2) |
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Genomic approaches to understanding pattern formation |
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605 | (6) |
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Part VI: THE IMPACT OF GENETIC VARIATION |
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611 | (32) |
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Variation and its modulation |
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612 | (9) |
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Effect of sexual reproduction on variation |
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621 | (5) |
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626 | (3) |
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629 | (5) |
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634 | (2) |
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636 | (7) |
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643 | (36) |
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Genes and quantitative traits |
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645 | (2) |
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Some basic statistical notions |
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647 | (2) |
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Genotypes and phenotypic distribution |
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649 | (2) |
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Norm of reaction and phenotypic distribution |
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651 | (1) |
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Determining norms of reaction |
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652 | (2) |
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The heritability of a quantitative character |
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654 | (2) |
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656 | (8) |
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664 | (3) |
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667 | (12) |
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679 | (28) |
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A synthesis of forces: variation and divergence of populations |
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682 | (3) |
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685 | (2) |
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Heritability of variation |
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687 | (1) |
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Observed variation within and between populations |
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688 | (1) |
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The process of speciation |
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689 | (2) |
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691 | (4) |
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Rate of molecular evolution |
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695 | (1) |
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Genetic evidence of common ancestry in evolution |
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696 | (2) |
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Comparative genomics and proteomics |
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698 | (9) |
| A Brief Guide to Model Organisms |
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707 | (16) |
| Appendix A: Genetic Nomenclature |
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723 | (1) |
| Appendix B: Bioinformatics Resources for Genetics and Genomics |
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724 | (3) |
| Glossary |
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727 | (22) |
| Answers to Selected Problems |
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749 | (14) |
| Index |
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763 | |